Temporal Shifts in Microbial Communities in Nonpregnant African-American Women with and without Bacterial Vaginosis

Bacterial vaginosis (BV) has been described as an increase in the number of anaerobic and facultatively anaerobic bacteria relative to lactobacilli in the vaginal tract. Several undesirable consequences of this community shift can include irritation, white discharge, an elevated pH, and increased susceptibility to sexually transmitted infections. While the etiology of the condition remains ill defined, BV has been associated with adverse reproductive and pregnancy outcomes. In order to describe the structure of vaginal communities over time we determined the phylogenetic composition of vaginal communities from seven women sampled at multiple points using 16S rRNA gene sequencing. We found that women with no evidence of BV had communities dominated by lactobacilli that appeared stable over our sampling periods while those with BV had greater diversity and decreased stability overtime. In addition, only Lactobacillus iners was found in BV positive communities

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Adsorption of sodium dodecylsulfate on single-walled carbon nanotubes characterised using small-angle neutron scattering

AbstractAqueous dispersions of single-walled carbon nanotubes are often made using sodium dodecylsulfate (SDS), which adsorbs to the nanotube surface to stabilise them. Despite SDS being commonly used with single-walled carbon nanotubes, there is no consensus on the structure of the adsorbed layer. Small-angle neutron and X-ray scattering results reported here show that the data can be fitted to a relatively simple core-shell cylinder model, consistent with a polydisperse nanotube core of radius 10Å, surrounded by an adsorbed surfactant layer of thickness 18Å and volume fraction of 0.5. This is consistent with small nanotube bundles surrounded by an adsorbed layer of extended SDS molecules

Linear and star architecture methacrylate-functionalised PDMS

Methacrylate-terminated poly(dimethylsiloxane)s in both linear and star architectures have been produced through a time-efficient 1 pot, 2 stage reaction which involved hydrosilylation of small molecule silanes with allyl methacrylate and subsequent equilibration of the product with octamethylcyclotetrasiloxane (D4) in the presence of an acid catalyst. This synthetic route required only one work-up procedure and the products were comparable to those produced by 2 step processes typically reported in literature. All methacrylate-terminated products were approximately double the molar masses anticipated based on reagent loadings. This is thought to be due to redistribution of siloxane bonds in the presence of the platinum hydrosilylation catalyst accompanied by a loss of silicon from the reaction by evaporation of dimethylsilane. It is believed that this is the first report of such siloxane equilibration occurring at room temperature

Defining the "core microbiome" of the microbial communities in the tonsils of healthy pigs

BACKGROUND: Porcine tonsils are the colonization site for many pathogenic as well as commensal microorganisms and are the primary lymphoid tissue encountered by organisms entering through the mouth or nares. The goal of this study was to provide an in-depth characterization of the composition and structure of the tonsillar microbial communities and to define the core microbiome in the tonsils of healthy pigs, using high throughput bar-coded 454-FLX pyrosequencing. RESULTS: Whole tonsils were collected at necropsy from 12 16-week-old finisher pigs from two healthy herds. Tonsil brushes were also used to collect samples from four of these animals. Bacterial DNA was isolated from each sample, amplified by PCR with universal primers specific for the bacterial 16S rRNA genes, and the PCR products sequenced using pyrosequencing. An average of 13,000 sequences were generated from each sample. Microbial community members were identified by sequence comparison to known bacterial 16S rRNA gene sequences. The microbiomes of these healthy herds showed very strong similarities in the major components as well as distinct differences in minor components. Pasteurellaceae dominated the tonsillar microbiome in all animals, comprising ~60% of the total, although the relative proportions of the genera Actinobacillus, Haemophilus, and Pasteurella varied between the herds. Also found in all animals were the genera Alkanindiges, Peptostreptococcus, Veillonella, Streptococcus and Fusobacterium, as well as Enterobacteriaceae and Neisseriaceae. Treponema and Chlamydia were unique to Herd 1, while Arcanobacterium was unique to Herd 2. Tonsil brushes yielded similar results to tissue specimens, although Enterobacteriaceae and obligate anaerobes were more frequently found in tissue than in brush samples, and Chlamydia, an obligately intracellular organism, was not found in brush specimens. CONCLUSIONS: We have extended and supported our previous studies with 16S clone libraries, using 16S rRNA gene pyrosequencing to describe the microbial communities in tonsils of healthy pigs. We have defined a core microbiome, dominated by Pasteurellaceae, in tonsil specimens, and have also demonstrated the presence of unique minor components of the tonsillar microbiome present in each herd. We have validated the use of noninvasive tonsil brushes, in comparison to tonsil tissue, which will facilitate future studies.Beth A. Lowe, Terence L. Marsh, Natasha Isaacs-Cosgrove, Roy N. Kirkwood, Matti Kiupel and Martha H. Mulk

Clinician-facilitated physical activity intervention versus pulmonary rehabilitation for improving physical activity in COPD: a feasibility study

Pulmonary rehabilitation (PR) may not suit all individuals with chronic obstructive pulmonary disease (COPD) and may not result in increased physical activity. Higher levels of physical activity are associated with reduced mortality and morbidity. The aim of this study was to assess the feasibility of conducting a trial to investigate the effectiveness of a clinician-facilitated physical activity intervention (PAI) versus PR in improving physical activity in patients with COPD referred to PR. In this randomised controlled mixed methods feasibility study, all patients referred to PR who were eligible and willing were assessed at baseline and then randomised to the PAI or to PR. The assessments were repeated post-intervention and at 3-month follow-up. The main outcome was step count measured by Actigraph. Semi-structured interviews were conducted post-intervention. The N = 50 patients; mean (SD) age, 64.1(8.6) years, 24M were recruited and randomised; N = 23 (PAI) and n = 26 (PR): one patient was excluded from the analysis as that person did not meet the GOLD diagnostic criteria. Key feasibility criteria were met; recruitment was 11%, dropouts in PAI were 26% (n = 6) and 50% (n = 13/26) PR. Participants in both groups experienced a range of health benefits from their respective programmes. The PAI appears to be effective in increasing step counts in people with COPD: mean change (standard deviation) [confidence interval] for the PAI group was 972.0(3230.3)[–1080.3 to 3024.4], n = 12 and 4.3(662.7)[-440.9 to 449.5], n = 11 for the PR group. The PAI met all domains of fidelity. This study provides key information to inform a future-randomised controlled trial in physical activity

Magazines for youth? : a comparative content analysis of two New Zealand juvenile periodicals

This research project investigated the readership of two New Zealand youth magazines during the period 1945-1947. The magazines, Conquest: the magazine for youth, and Junior Digest: the magazine for girls and boys, were subjected to a content analysis which attempted to capture details of the readers, and describe the types of articles in each magazine in an attempt to discover what kinds of reading tastes young people of the period had. The project produced a description of the kinds of content that were present in the two magazines and in what quantities. By combining this content analysis with demographic data of the readers themselves, who contributed to the magazines by sending letters, jokes, competition entries and jokes, this research was able to show who the specific group of readers were and make conclusions about what they liked. By contrasting the results, it was determined that there were slight differences in the content of the magazines which may have accounted for the failure of Conquest to continue after July 1947, but that the data provided by the content analysis alone was insufficient to allow insight into the broader periodical reading tastes of New Zealand youth in the second half of the 1940s